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Insights into Metallic Ag+, Cu2+, Zn2+ Ions-Induced Bacteriolytic Mechanism against S. Aureus and E. Coli

Tsuneo Ishida*

2-3-6, Saido, Midori-Ku, Saitama-Shi, Saitama-Ken, 〒336-0907, Japan

*Corresponding author: Dr. Sci. Tsuneo Ishida, Retired, own's at home Researcher, 〒336-0907, Japan; Tel: 048-881-3970; Email: [email protected]

Received Date: December 12, 2022

Accepted Date: January 15, 2023

Publication Date: January 28, 2023

Citation: Ishida T. (2023). Insights into Metallic Ag+, Cu2+, Zn2+ Ions-Induced Bacteriolytic Mechanism against S. Aureus and E. Coli. Catalysis Research. 3(1):05.

Copyright: Ishida T. © (2023).

ABSTRACT

Metallic Ag+, Cu2+, Zn2+ ions, respectively, induced bacteriolytic mechanism has been elucidated against S. aureus and E. coli. Bacteriolytic mechanism for Ag+, Cu2+, Zn2+ ions, respectively, induced S. aureus is clarified that bacteriolysis and destruction of S. aureus PGN cell wall occur by inhibition of PGN elongation through metallic Ag+, Cu2+, Zn2+ ions-induced PGN inhibitory transglycosylase (TG) and transpeptidase (TP) syntheses (TG for Zn2+) and PGN activated major autolysin of amidase. The other, bacteriolytic mechanism for Ag+, Cu2+, Zn2+ ions, respectively, induced E. coli is found that bacteriolysis and destruction of E. coli cell wall occur by disruption of E. coli outer membrane (OM) structure with OM lipoprotein-endopeptidase activation, and by inhibition of PGN elongation through inhibitory TG and TP syntheses (TG for Zn2+) and PGN activated major autolysins.

Ag+, Cu2+, Zn2+ ions-induced ROS generation of O2- and H2 O2 and ROS-mediated oxidative stress in bacterial cell lead to killing by stress damage for silver ions, cell membrane damages due to high reactive •OH and OH are formed by Haber-Weiss and Fenton reactions for Cu2+ ions, and DNA molecular damage for Zn2+ ions.

Keywords: Ag+, Cu2+, Zn2+ ions, Bacteriolysis, PGN synthesis and autolysin, PGN elongation, E. coli OM structure, Autolysin amidase, ROS-mediated oxidative stress

ABBREVIATIONS

BLP=Braun’s lipoprotein, CTD=C-terminal domain, E. coli=Escherichia coli, IMP=integral membrane protein, LdtF=l,d- transpeptidase factor, Lpp=lipoprotein, LPS=lipopolysaccharide, MBP=maltose-binding protein, NAG=N-acetylglucosamine, NAM=N-acetylmuramic acid, NTD=N-terminal domain, OM=outer membrane, OMP=outer membrane protein, Omp=outer membrane porin, Pal=Protein associated lipoprotein, PGN=peptidoglycan, PGRPs=peptidoglycan recognition proteins, ROS= reactive oxygen species, S. aureus=Staphylococcus aureus, SNF=silver nanoformulation form, TG=transglycosylase, Tol=Tol proteins, TP=transpeptidase, ZnPT=zinc pyrithione.

INTRODUCTION

High antibacterial activities for Ag+, Cu2+, Zn2+ ion solutions have the processes of bacteriolyses and destructions of bacterial cell walls against Staphylococcus aureus (S. aureus) peptidoglycan (PGN) and Escherichia coli (E. coli) outer membrane cell walls. Ag+, Cu2+. Zn2+ ion solutions having very high antibacterial abilities call attention to potential treatments such as the prevention of serious diseases, and restriction of viral infection. Anti-bacterial activity of silver(Ⅰ) ions depends on bacteriolysis and destruction of bacterial cell walls, in which silver ions inhibit PGN elongation and PGN biosynthesis, and enhance PGN autolysin activation [1]. Especially, the interaction of silver ions with Escherichia coli (E. coli) used as a model microorganism is characterized by energy-filtering transmission electron microscopy (EFTEM) that the outer membrane and the interior cell membrane with cytoplasmic protein were destructed by silver ions [2], in which bacterial killing of silver ions is shown to have a strong highest function for the destructions of E. coli outer membrane lipoprotein and inner membrane protein.

Copper ions destroy the bacterial cell wall, which becomes thick and coarse, the cytoplasm is then degraded and disappears, leading finally to cell death. The antibacterial mechanism is attributed mainly to the strong adsorption of copper ions to bacterial cells, which imparts antibacterial efficacy in a concentration-dependent manner [3]. The bacteriolytic mechanisms by copper(Ⅱ) ions had been revealed that bacteriolysis of S. aureus PGN cell wall by Cu2+ ions is ascribed to the inhibition of PGN elongation due to the damages of PGN biosynthesis of transglycosylase (TG) and transpeptidase (TP), and the Cu2+ ions-induced activated PGN autolysins, whereas bacteriolysis of E. coli outer membrane cell wall by Cu2+ ions is attributed to the destruction of outer membrane structure and the inhibition of PGN elongation due to the damage of PGN biosynthesis TP and the activations of PGN autolysins [4].

Zn2+ ions can be internalized into the bacterial cell and disrupt the enzymatic system. ROS production (causing the destruction of cellular components such as DNA, proteins and lipids): O2− and HO2− do not penetrate the membrane, but direct contact causes damage, and H2O2 is internalized. Internalization within the bacteria cell and direct contact cause damage such as the loss of cellular integrity [5]. Zinc ions-induced anti-bacterial mechanism also may be clarified. It had appeared that the anti-bacterial effects had the order of Zn2+ > Cu2+ > Ag+ > Al3+ in metallic ion concentration 100 mL of the sulfate solution under the halo inhibitory tests, in which Zn2+ ion indicated to be the highest effect in the sulfates [6].

In this semi-review article, silver(I)-, copper(Ⅱ)-, zinc(Ⅱ)-, respectively, induced bacteriolytic functions of inhibition or activation of E. coli outer-membrane lipoprotein, PGN elongation by bacterial PGN inhibitory synthesis, and PGN activated major autolysins are investigated against S. aureus and E. coli. Subsequently, insights into bacteriolytic mechanisms for silver, copper, and zinc ions-induced bacteriolyses and destructions of bacterial cell wall are elucidated from relating metallic ions-induced bacteriolytic denaturation of outer-membrane lipoprotein (Braun’s lipoprotein), bacterial PGN elongation, syntheses, and autolysins.

Bacterial surface molecular structures, S. aureus PGN cell walls, E. coli OM lipoprotein, PGN syntheses, PGN autolysins, and the action sites of S. aureus PGN cell walls, E. coli OM lipoprotein, PGN syntheses TG/TP, and PGN autolysins against S. aureus and E. coli.

Figure 1 (a), (b) show S. aureus and E. coli surface molecular structures, E. coli OM lipoprotein, bacterial PGN syntheses TG/TP, PGN autolysins, and the action sites of E. coli OM lipoprotein Endopeptidase, PGN syntheses TG/TP, and PGN autolysins against S. aureus and E. coli. Table 1 is represented summarily E. coli OM lipoprotein degrading enzyme, and bacterial PGN syntheses and autolysins against S. aureus and E. coli that E. coli OM lipoprotein-endopeptidase, these PGN syntheses, and autolysins sites are shown in Figure 1 (a), (b). Bacterial PGN structures of both Gram-positive and Gram-negative bacteria comprise repeating disaccharide backbones of N-acetylglucosamine (NAG) and β-(1-4)-N-acetylmuramic acid (NAM) that are crosslinked by peptide stem chains attached to the NAM residues [7].

S. aureus surface layer consists of teichoic acids, lipoteichoic acids, and thick PGN cell wall, in which the molecular structure of S. aureus PGN cell wall and the action sites of synthesis TG/TP enzymes and PGN forth autolysins, as shown in Figure 1(a). For Staphylococcus aureus (S. aureus) PGN layer, there are biosynthesis TG/TP and forth autolysins of N-acetylmuramidase and N-acetylglucosamidase, N-acetylmuramidase-L-alanine amidase and PGN chain cross-linkage DD-endopeptidase. The S. aureus killing mechanism was more likely due to activation autolysins along with minimum membrane disruption [8]. In these autolysins, zinc- dependent PGN major autolysin of amidases chiefly may be enhanced induced anti-bacterial activities. The other, E. coli cell wall consists of lipid A, lipopolysaccharide, porin proteins, outer membrane of lipoprotein, and thinner 2-7 nm PGN layer in 30-70 nm periplasmic space [9].

E. coli cell wall is constituted of lipopolysaccharide (LPS), lipoproteins (LPT), and PGN, thinner layer within periplasmic space. The first permeability barrier of zinc ions in the E. coli cell wall is highly anionic LPS with hydrophobic lipid A, core polysaccharide, O-polysaccharide, in which zinc ions may be possible for the inhibition of LPS biosynthesis, owing to that promotes formation of metal-rich precipitates in a cell surface [10]. E. coli Braun’s lipoprotein (BLP) of outer-membrane (OM) lipoprotein that BLP is anchored in the OM via a lipidated N-terminus, whereas the C-terminus is covalently attached to the peptide chain of PGN and that BLP exists in PGN-bound and PGN-unbound states, the length of BLP has a direct influence on the distance between the peptidoglycan layer and the outer membrane of E. coli in Figure 1(b) [11]. Penicillin binding protein4 (PBP4) localizes specifically at midcell as part of the division machinery that PBP4 is a periplasmic endopeptidase with a C-terminal amphipathic alpha-helix that associates with membranes and has three domains [12]. Despite its conservation throughout evolution among pathogenic and non- pathogenic bacteria, OmpA interacts with specific receptors for initiating pathogenesis in some Gram-negative infections [13].

The gram‐negative bacterial cell envelope is made up of an OM, an inner membrane (IM) that surrounds the cytoplasm, and a periplasmic space that in several bacteria, including E. coli, the OM is tethered to PGN by an abundant OM lipoprotein, Lpp (or Braun’s lipoprotein), that functions to maintain the structural and functional integrity of the cell envelope. Since its discovery, Lpp has been studied extensively, and although L,D-transpeptidases, the enzymes that catalyze the formation of Lpp-PGN linkages, have been earlier identified, it is not known how these linkages are modulated. Recently, LdtF is identified as an endopeptidase that cleaves the Lpp-PGN cross-links and as a glycine-specific carboxypeptidase [14]. For Escherichia coli (E. coli) cell wall, there are endopeptidase and aminopeptidase of degrading enzyme at lipoprotein of N- and C-terminals, and amidase, peptidase, and caboxypeptidase at thin PGN layer in periplasmic space [15].

Figures 1(a),(b): S.aureus and E.coli surface molecular structures, bacterial PGN syntheses TG/TP, PGN autolysins, and the action sites of PGN syntheses TG/TP and PGN autolysins against S.aureus and E.coli.

Table 1: Bacterial PGN syntheses and autolysins in S. aureus, and outer membrane lipoprotein degrading enzyme, PGN syntheses and autolysins in E. coli.

Insight into silver() ions-induced bacteriolysis function against S. aureus and E. coli

(1) Silver() ions induced PGN cell wall inhibitory synthesis TG/TP against S. aureus

In silver nitrate solution, AgNO3 is dissociated into aqua silver ion [Ag (H2O)2]+ and nitrate ion (NO3), aqua silver ions are liable to be bound to ligand L having negative charge. The nitrate ion has bactericidal inactivity. For silver nitrate in solution is

AgNO3 + 2H2O = [Ag(H2O)2]+ + (NO3)

[Ag(H2O)2]+ + L- = Ag(H2O)2L

Ag(H2O)2L = AgL + 2H2O

The released Ag+ ions from AgNO3 solution penetrate into bacterial cells, can inhibit the growth of Gram-positive B. subtilis bacterium which exerts toxicity by damaging cellular membrane, degrading chromosomal DNA, lowering reductase activity, and reducing protein expression. Wall teichoic acids are spatial regulators of PGN crosslinking biosynthesis of transpeptidase (TP), and silver ions could inhibit both transglycosylase (TG) and TP enzymes of the PGN that Ag+-induced bacteria may inactivate PGN synthesis TG and TP [16]. Silver ions can inhibit both TG and TP enzymes of the PGN that Ag+-induced bacteria inactivate PGN synthesis transglycosylase TG and transpeptidase TP [17,18]. In proteins, the coordination is limited by His, Cys, Glu, and sulfur donors from the side chains of a few amino acids.

(2) Silver ions induced activation of PGN major autolysins against S. aureus cell wall

For the sake of growth of S. aureus thick PGN layer cell wall, there is necessarily required for the adequate balance between PGN synthesis and PGN autolysin. When the balance was broken to be imbalanced, bacteriolysis and destruction of the cell wall should occur. Hence, it became apparent that bacteriolysis of S. aureus PGN cell wall by Ag+ ions is caused by inhibition of PGN elongation due to inactivation of PGN TG or TP and enhancement of activation of PGN autolysins of amidases, in which silver ions enhance activation of PGN autolysins of amidases [19]. Thus, Ag+ ions activate PGN major autolysins of bacteriolysis of S. aureus PGN cell wall, in which wall teichoic acids control PGN synthesis cross-linking TP, is due to the inhibition of PGN elongation by enhancing the activities of PGN autolysins; amidase AmiA and AmiE, and PGN hydrolase Lysostaphin-like endopeptidase (Glycine-Glycine bond cleavage).

Accordingly, Ag+ ions-induced bacteriolytic mechanism against S. aureus has been found that bacteriolysis and destruction of the PGN cell wall occur by Ag+ ions-induced inhibition of PGN elongation through inhibitive TG/TP and PGN activated major autolysin.

(3) Silver ions induced disruption of E. coli outer membrane structure by hydrolases of lipoproteins at C- and N-terminals

E. coli outer-membrane lipoprotein structure had been observed to be destructed by silver ions [2], in which silver ion is shown to have interaction with protein Braun lipoprotein. Silver nitrate has interaction with protein Braun lipoprotein and is capable of making interaction with many proteins by that bioinformatic interaction of silver nitrate with Braun lipoprotein [20].

It is unclear whether both Aminopeptidase and Endopeptidase (or L,D-transpeptidase, LdtF) of lipoprotein at C- and N-terminals are simultaneously activated by Ag+ ions. However, outer membrane may be considered to be disrupted probably by predominant activation of lipoprotein-endopeptidase. There is no data about Ag-lipoprotein aminopeptidase, LdtF enzyme interactions, hence, whether Ag+ ions react with endopeptidase enzyme or not [14].

Silver inhibits outer membrane protein (OMP) that the molecular mechanism of the antibacterial activity of silver and molecular changes in bacterial cells strongly depend on the physical and chemical properties of the tested silver nanoformulation form (SNF) [21]. A silver-binding peptide, AgBP2, was identified from a combinatorial display library and fused to the C terminus of the E. coli maltose-binding protein (MBP) to yield a silver-binding protein exhibiting nanomolar affinity for the metal [22].

Silver ions may be accumulated and damaged in E. coli PGN synthetic enzyme of silver protein endopeptidase in periplasmic space, in which the silver ions are spent to the activation of bacteriolysis of the cell wall and efflux activity to extracellular cell. Then, endopeptidase (L,D-transpeptidase, LdtF) of lipoprotein endopeptidase is degradative by Ag+ binding proteins.

(4) Silver ions-induced activation of PGN major autolysins of amidase, peptidase, and carboxypeptidase against E. coli Silver ions inactivate TP of endopeptidase by because of destructive observation of bacterial cell walls. Silver ions could activate E. coli PGN autolysins of amidase, peptidase, Carboxypeptidase, such as silver depending PGN autolysin, AmiC, AmiD, Muramidase, Amino acid amidase, Carboxypeptidase A, Bacteriolysis and destruction for E. coli cell wall also are considered to be due to the damage of LPS synthesis, destructing of outer membrane structure by degrading of lipoprotein at C-, N-terminals, and to be owing to inhibition of PGN formations by inactivation of carboxypeptidase and TP-endopeptidase, and activities of PGN autolysins of amidase, peptidase, and carboxypeptidase.

Thus, bacteriolytic mechanism for Ag+ ions against E. coli has been found that silver ions induced bacteriolysis and destruction of E. coli cell wall are caused by the disruption of outer membrane structure owing to the activation of endopeptidase of lipoprotein at C-, and N-terminals, and by the inhibition of PGN elongation through the damage of PGN synthetic TG/TP enzyme and PGN major activated autolysins of Amidase, Peptidase, and Carboxypeptidase in silver-protein amidases in periplasmic space. Specially, the inhibition of PGN elongation occurs by silver ion induced activities of PGN hydrolases and autolysins.

(5) Silver() ions induced ROS generation in S. aueus and E. coli

For the penetration of Ag+ ions to S. aureus PGN cell wall, the ROS production such as superoxide anion radical O2, hydroxyl radical ・OH,hydrogen peroxide H2O2 occurred from superoxide radical O2 molecular. O2 and H2O2 permeate into membrane and cytoplasm, and then, DNA molecular is damaged by oxidative stress [23]. Silver ions react with -SH, and H+ in E. coli that free radicals O2, OH,・OH and H2O2are formed as follows:

O2 + e → O                      2O  +2H+→ H2O2 + O2              O  + H2O2→OH +・OH+O2

In cell wall, reacting with polyunsaturated fatty acids:

LH + OH・ → L・ + HOH                                 L・ + O2→LOO・ LH + LOO・ →L・ +LOOH

Thus, Ag+-containing peptidoglycan recognition proteins (PGRPs) induce ROS production of H2O2, O, HO, and then the ROS occur oxidative stress, and killing by stress damage [24].

Insight into copper(Ⅱ) ions-induced bacteriolysis function against S. aureus and E. coli

(1) Copper(Ⅱ) ions-induced S. aureus with coordinated limited ligand

Copper is redox-inert and has only one valence state of Cu(II). In proteins, the coordination is limited by His, Cys, Glu, and sulfur donors from the side chains of a few amino acids. In copper sulfate solution, CuSO4 is dissociated into aqua Cu ion [Cu (H2O)6]2+ and sulfuric ion(SO) aqua Cu ions are liable to be bound to ligand L having negative charge. The sulfuric ion has bactericidal inactivity

Cu(NO3)2 + 6H2O = [Cu(H2O)6]2+ + 2(NO3)

[Cu(H2O)6]2+ + 2L- = CuL2 + 6H2O

(2) Inhibition of polymerization of glycan chains bonding and cross-linking of side peptide

Cu2+ ions may inhibit polymerization of glycan chains, forming copper complex in which is partial action sites of glycan saccharide chains [4]. L is coordinated molecular.

Cu2+ + LH → CuL+ + H+                         CuL+ + LH → CuL2 + H+

Copper-complexes on saccharide chains may be,

Glycan chaine;                 ―NAG-(NAM-Cu-2O-2N-NAG)-NAM― .

The other, Cu2+ ions may inhibit cross-linked reaction by peptide copper complex formation bonding to sidepeptide chains.

Cu2+ + 2LH → CuL2 + H+

Peptide copper complex may be 3N-Cu-O, Cu (Gly-L-Ala) H2O. Specially, Cu2+ ions react with cross-molecular penta glycine (Gly)5, copper-glycine complex may be formed.

Amino acid:Cu2+ + Gly →Cu (Gly),               Cu (Gly)+ + Gly → Cu(Gly)2,

PeptidoCu2+ + GlyGly Cu (GlyGly),             Cu (GlyGly) + Gly Cu(GlyGlyGly)

(3) Cu2+ ions induced bacteriolysis of S. aureus PGN cell wall by inhibition of PGN elongation through inhibitory TG/TP enzymes and PGN activated major autolysins

Bacteriolysis by balance deletion between synthesis enzyme and decomposition enzyme (autolysin) in PGN cell wall: For the sake of growth of S. aureus PGN cell wall, there is necessarily required for the adequate balance between PGN synthesis and PGN autolysin. When the balance is broken by Cu2+ penetration, Cu2+ ions are self-catalytically treated as coenzyme, that this is indicated that activation of autolysin is preceded, in which bacteriolysis and killing may result.

Copper ions inhibit PGN synthesis TG/TP against S. aureus that damages PGN synthetic TG/TP [25]. Cu2+ ions could activate PGN autolysin, AmiA [26,27]. Hence, bacteriolysis of S. aureus PGN cell wall by Cu2+ ions is due to inhibition of PGN elongation owing to the damages of PGN synthetic TG/TP and the activation of PGN major autolysins of AmiA.

(4) Bacteriolysis and destruction of E. coli outer membrane cell wall by Cu2+ ions

Inhibition of outer membrane cell wall: Cu2+ ions inactivate catalyst enzyme with forming Cu+ ions.

Cu2+ + -SH → -SCu(Ⅰ) + H+

By the penetration of Cu2+ ions, the activations of amidase enzyme of N-terminal and endopeptidase enzyme of C-terminal are enhanced. Interaction of copper ion with E. coli Braun lipoprotein is considered that copper dramatically decreases the minimal inhibitory concentration of ampicillin in E. coli strain with a resistance mechanism relying on LD-transpeptidases (LDTs) and inhibits purified LDTs at submillimolar concentrations [28].

Accordingly, bactericidal mechanism for Cu2+ ions against S. aureus is found that bacteriolysis and destruction of S. aureus cell wall occur by Cu2+ ions-induced inhibition of PGN elongation through inhibitive syntheses TG/TP and PGN activated major autolysins.

The other, bactericidal mechanism for Cu2+ ions against E. coli is found that bacteriolysis and destruction of E. coli cell wall occur by disruption of outer membrane structure due to degradation of lipoprotein at N-, C-terminals, damage of TG/TP enzyme and activation of PGN autolysins.

(5) Cu2+ ions-induced ROS production in S. aureus and E. coli

Cu2+ ions-induced reactive oxygen species (ROS) O2 and H2O2 generated in the cell wall, and permeate into cell membrane and cytoplasm, in which in cell membrane high reactive •OH and OH are formed by Haber-Weiss and Fenton reactions.

Haber-Weiss reaction; H2O2 + O2- → •OH + OH- + O2

Fenton reaction; Cu+ + H2O2 → •OH + OH + Cu2+

Furthermore, new ROS productions occur by Fenton-like type. L=Ligand

LCu(II) +H2O2→LCu(I) + ・OOH + H+                                             LCu(I)+H2O2 → LCu(II)+ •OH+OH

Production of reactive oxygen species (ROS) against S. aureus. O2 and H2O2 permeate into membrane and cytoplasm, that DNA molecular is damaged by oxidative stress [23]. By the penetration of copper ions into bacterial cell wall, productions of O2, H+,

H2O2, ONOO occurs.The other, in E. coli cell wall, the productions of O , H+ in outer membrane, and H2O2, OH, ・OH in periplasmic space occur. These ROS and H2O2 damage the cell membrane and the DNA molecules by oxidase stress [29].

Insight into zinc(Ⅱ) ions-induced bacteriolysis function against S. aureus and E. coli

(1) Zinc ions-induced zinc-proteins complex formation against S aureus

In bacteriolysis of S. aureus PGN cell wall by Zn2+ ions against S. aureus, zinc is redox-inert and has only one valence state of Zn(II). In proteins, the coordination is limited by His, Cys, Glu, and sulfur donors from the side chains of a few amino acids. In zinc sulfate solution, ZnSO4 is dissociated into aqua zinc ion [Zn (H2O)6]2+ and sulfuric ion (S4O2) aqua zinc ions are liable to be bound to ligand L having negative charge. The sulfuric ion has bactericidal inactivity [30].

ZnSO4 + 6H2O → [Zn(H2O)6 ]2+ + (SO4) [Zn(H2O)6]2+ + 2L → [Zn(H2O)L2] + 5H2O Zn(H2O)L2 → ZnL2 + H2O

Structural Zn2+ ions are most commonly coordinated by cysteine, followed by histidine, aspartate, and glutamate that Zn-cysteine complex in bacteria, and Zn2+ chelation represents a potential therapeutic approach for combating biofilm growth in a wide range of bacterial biofilm-related infections [31].

(2) Zinc ions-induced PGN inhibitive synthesis enzymes of TG and TP against S aureus

Zinc disrupts PGN synthesis in bacterial cell wall [32] and wall teichoic acids are spatial regulators of PGN cross-linking biosynthesis TP, however, it is not explicit whether zinc ions could inhibit both TG and TP enzymes of the PGN, wherein due to uncertain relation between wall teichoic acids biosynthesis and PGN biosynthesis [33]. Metallation of PerR with Zn(II) disrupts this coordination, resulting in depression of heme synthesis but continued repression of catalase that Zn(II) intoxication leads to intracellular heme accumulation from measurement of heme content of crude extract of cells treated with zinc concentration 50 μM Zn(II) [34]. Zinc intoxication also is observed to disrupt or inhibit PGN biosynthesis [35]. The bactericidal activity of Zn2+- dependent peptidoglycan recognition proteins (PGLYRPs) is salt insensitive and requires N-glycosylation of PGLYRPs that the LD99 of PGLYRPs for Gram-positive and Gram-negative bacteria is 0.3–1.7 M, and killing of bacteria by PGLYRPs does not involve permeabilization of cytoplasmic membrane, namely, zinc may be shown to inhibit PGN biosynthesis TG [36]. But, these limited PGLYRPs don't be applicable for Gram-negative bacteria. Thus, zinc ions could inhibit PGN synthesis TG against S. aureus.

(3) Zinc ions-induced PGN inhibitive elongation due to inhibitory TG enzyme and activation of autolysin against S aureus

Zn2+ binding Rv3717 showed no activity on polymerized PGN and however, it is induced to a potential role of N-Acetylmuramyl L-alanine Amidase [37], PGN murein hydrolase activity and generalized autolysis; Amidase MurA [38], Lytic Amidase LytA [39], enzymatically active domain of autolysin LytM [40], Zinc-dependent metalloenzyme AmiE [41] as prevention of the pathogen growth, and Lysostaphin-like PGN hydrolase and glycylglycine endopeptidase LytM [42]. Zn2+ ions-induced bacteriolysis and destruction of S. aureus PGN cell wall could be enhanced by the inhibitions of PGN elongation simultaneously with the activations of these PGN autolysins. Thus, zinc(Ⅱ) ions can impair the activity of PGN biosynthesis TG and PGN elongation by bacteriolytic destruction of bacterial cell walls, causing bacterial lysis [43].

Accordingly, zinc induced PGN inhibitory synthesis corresponds to disruption of bacterial cell wall, but zinc ions may be possible to inhibit PGN synthesis TG and PGN elongation by PGN activated major autolysin of amidase against S. aureus.

(4) Zinc ions-induced disruptive outer membrane structure by hydrolases of lipoproteins at C-, N-terminals against E. coli

In zinc ion uptake across the outer membrane, the lipoproteins of Omp A, Omp C, Omp F porins have a role for at least some of these proteins in Zn2+ uptake, in which the lipoproteins have metallic cation selective and hydrophilic membrane crossing pore, to be effective for zinc transfer [43]. Zinc (II) ions react with -SH base, and then H2 generates. Zinc bivalent is unchangeable as

-SZn―S― bond 4-coordinated.

Zn2+ + 2(-SH) → -SZn(II) –S– + 2H+

ZnPT (zinc pyrithione) and Tol (Tol proteins)-Pal (Protein associated lipoprotein) complex are antimicrobial agents widely used, however, it has recently been demonstrated to be essential for bacterial survival and pathogenesis that outer membrane structure may be disrupted [45,46]. Interaction zinc ions with E. coli Braun lipoprotein may be considered that Lpp as a new target of antimicrobial peptides is Gram-negative bacterial cell surface receptor for cationic antimicrobial peptides [47].

(5) Zinc ions-induced PGN inhibitive elongation through the damage of PGN synthesis enzyme of zinc-protein in periplasmic space and the activation of PGN autolysins against E. coli

The zinc-induced decrease of protein biosynthesis led to a partial disappearance of connexin-43 of protein synthesis in neurons [48], but it is unknown whether PGN synthesis is inhibited. Further, it is also unclear whether the both TG/TP should be inhibited by the zinc ions [49-51]. The other, zinc ions were accumulated in E. coli periplasmic space, in which the zinc ions are spent to the activation of bacteriolysis of the cell wall. Zinc depending PGN autolysin, amidase PGRPs [52], zinc metallo enzymes AmiD [53], zinc-containing amidase; AmpD [54], zinc-present PGLYRPs [55] serve to be effective for the PGN autolysins. It is particularly worth noting that enhancement of the activities of autolysins is characterized on PGN carboxypeptidase-transpeptidase IIW [23] requiring divalent cations. Thus, the inhibition of PGN elongation had been occurred by zinc ion-induced activa tions of PGN hydrolases and autolysins.

Accordingly, bactericidal mechanism for Zn2+ ions against E. coli is found that bacteriolysis and destruction of E. coli cell wall occur by disruption of outer membrane structure due to degrading of lipoprotein at C-, N-terminals and PGN formation inhibition through PGN inhibitive synthesis TG and PGN activated autolysins of amidase and carboxypeptidase-transpeptidase.

(6) Zinc ion-induced ROS generation against S. aureus and E. coli

Zinc induced production of reactive oxygen species (ROS) against S. aureus: O2 and H2O2 permeate into membrane and cytoplasm, that DNA molecular is damaged by oxidative stress [23]. For the penetration of zinc ions to PGN cell wall, the ROS production such as superoxide anion radical O2, hydroxyl radical •OH, hydrogen peroxide H2O2 occurred from superoxide radical O2 molecular [56]. O2  and and H2O2 permeate into membrane and cytoplasm, and then, DNA molecular is damaged by oxidative stress [57].

O2 + e- + H+ → • HO2

•HO2 → H+ + O2

H2O2 + e- → HO + • OH

2H+ + •O2 + •O2 → H2O2 + O2

H2O → •OH + •H + e- → H2O2

Zinc induced ROS production and oxidative stress against E. coli: Zinc ions react with -SH, and H+, ROS generate. In E. coli,

free radicals (O2, OH, •OH) and H2O2 are formed as follows [58]:

O2 + e → O2-                     2O2 + 2H+ → H2O2 + O2            O2 + H2O2 → OH + •OH + O2

In the cell wall, reacting with polyunsaturated fatty acids:

LH + OH• → L• + HOH                          L• + O2 → LOO•                 LH + LOO• → L• + LOOH

Zinc-containing Peptidoglycan Recognition Proteins (PGRPs) induce ROS production of H2O2 , O , HO•, the ROS occur the oxidative stress, and killing by stress damage [59].

Accordingly, as mentioned above, metallic Ag+, Cu2+, Zn2+ ions-induced PGN inhibitive synthesis TG/TP, distruptive OM lipoptotein, and PGN activated autolysin against S. aureus and E. coli cell walls are summarized in Table 2, in which are included in bacteriolytic mechanisms for complete-ionized metallic Ag+, Cu2+, Zn2+ ions.

Table 2: Metallic Ag+, Cu2+, Zn2+ ions-induced PGN inhibitive synthesis TG/TP, disruptive OM lipoprotein, and PGN activated autolysin against S.aureus and E.coli cell walls.

CONCLUSIONS

Insights into metallic Ag+, Cu2+, Zn2+ ions respectively induced bacteriolyses and destructions of bacterial cell walls are performed, subsequently, metallic Ag+, Cu2+, Zn2+ ions-induced bacteriolytic mechanisms are clarified against S. aureus and E. coli.

Bacteriolytic and destructive mechanism for Ag+ ions solution is clarified that bacteriolysis and destruction of bacterial cell wall occur by the disruption of E. coli outer membrane structure owing to the activation of Endopeptidase ( L,D-transpeptidase, LdtF) of lipoprotein at C- and N-terminals, and by inhibition of PGN elongation through the inactivation of PGN synthetic TG/TP enzymes and the activation of PGN major autolysins of amidase, peptidase, and carboxypeptidase against S. aureus and E. coli.

Bacteriolysis of S. aureus PGN cell wall by Cu2+ ions is thought to be due to inhibition of PGN elongation owing to the damages of PGN both synthetic TG/TP and the activations of PGN major autolysin of AmiA. The other, bacteriolysis of E. coli cell wall by Cu2+ ions occurs by disruption of outer membrane structure due to degradation of lipoprotein at N-,C-terminals, damage of PGN syntheses TG and TP enzyme, and activations of PGN major autolysins. Furthermore, deletion of PGN autolysin also becomes bacteriolytic factor.

Anti-bacterial activity of Zn2+ ions against S. aureus has been found that Zn2+ ions-induced PGN autolysin activation could be enhanced the inhibitions of PGN elongation simultaneously, with bacteriolysis and destruction of S. aureus PGN cell wall.

The activations of these PGN autolysins by Zn2+ ions could be enhanced the inhibitions of PGN elongation simultaneously, with bacteriolysis of S. aureus PGN cell wall. The other, antibacterial mechanism of Zn2+ ions against E. coli was found that Bacteriolysis and destruction of E. coli cell wall by Zn2+ ions are due to disruption of outer membrane structure by degrading of lipoprotein at C-, N-terminals, owing to PGN formation inhibition by damage of PGN synthesis TG and PGN autolysins of amidase and carboxypeptidase-transpeptidase.

Ag+, Cu2+, Zn2+ ions-induced ROS generation of O2 and H2O2 and ROS-mediated oxidative stress in bacterial cell lead to killing by stress damage for silver ions, cell membrane damages due to high reactive •OH and OH are formed by Haber-Weiss and Fenton reactions for Cu2+ ions, and DNA molecular damage for Zn2+ ions.

Accordingly, bactericidal mechanism for complete-ionized metallic Ag+, Cu2+, Zn2+ ions solutions has been established that Ag+, Cu2+, Zn2+ ions, respectively, induced the bacteriolyses and destructions of bacterial cell walls occur by disruption of E. coli outer- membrane lipoprotein and by inhibition of PGN elongation through PGN both inactive syntheses TG/TP (TG for Zn 2+ ion) and PGN activated major autolysin of amidase. Ag+, Cu2+, Zn2+ ions-induced ROS generation of O - and H O and ROS-mediated oxidative stress in bacterial cell lead to killing by stress damage, cell membrane damages due to high reactive •OH and OH, and DNA molecular damage.

CONFLICT OF INTEREST

The author declares there is no conflicts of interest.

FUNDING

None, author’s own expense

REFERENCES

  1. Ishida T. (2018). Antibacterial mechanism of Ag+ ions for bacteriolyses of bacterial cell walls via peptidoglycan autolysins, and DNA damage. MOJ Toxicol. 4(5):345‒350.
  2. Yamanaka M, Hara K, Kudo J. (2005). Characterization of the Interaction between Silver Ions and Escherichia Coli by Energy- Filtering Transmission Electron Microscopy Sharp Technical Reports. 91:45-49.
  3. Raffi M, Mehrwan S, Bhatti TM, Akhter JI, Hameed A, Yawar W, et al. (2010). Investigations into the antibacterial behavior of copper nanoparticles against Escherichia coli. Ann Microbiol. 60:75–80.
  4. Ishida T. (2017). Mechanism of Antibacterial Activities of Cu (Ⅱ) Ions against Staphylococcus aureus and Escherichia coli on the Ground of Results Obtained from Dilution Medium Method. Virol Immunol J. 1(3):1-8.
  5. da Silva BL, Abuçafy MP, Manaia EB, Oshiro JA Jr, Chiari-Andréo BG, Pietro RCR, et al (2019). Relationship Between Structure And Antimicrobial Activity Of Zinc Oxide Nanoparticles: An Overview. Int J Nanomed. 2014:9395–9410.
  6. Ishida T. (2017). Halo inhibitory zone tests and antibacterial activities for metallic salts aqueous solutions. J Prevent Med. 11(3):93-99.
  7. Ishida T. (2016). Bacteriolyses of Cu2+ solution on bacterial cell walls/cell membrane and DNA base pairing damages. J Biomed Res Trace Elements. 27(4):151-161.
  8. Yasir M, Dutta D, Willcox MDP. (2019). Mode of action of the antimicrobial peptide Mel4 is independent of Staphylococcus aureus cell membrane permeability. bioRxiv preprint. 9:1-25.
  9. Silhavy TJ, Kahne D, Walker S. (2014). The Bacterial Cell Envelope Cold Spring Harbor. Perspect Biol. 2:1-14.
  10. Langley S, Beveridge TJ. (1999). Effect of O-Side-Chain-LPS Chemistry on Metal Binding, Appl Environ Microbiol. 65(2):489-498.
  11. Samsudin F, Boags A, Piggot TJ, Khalid S. (2017). Braun’s Lipoprotein Facilitates OmpA Interaction with the Escherichia coli Cell Wall. Biophysical J. 113:1496-1404.
  12. Verheul J, Lodge A, Yau HCL, Liu X, Boelter G, Liu X, et al (2022). Early mid cell localization of Escherichia coli PBP4 supports the function of peptidoglycan amidases. PLoS Genet. 18(5):e1010222.
  13. Krishnan S, Prasadarao NV. (2012). Outer membrane protein A and OprF – Versatile roles in Gram negative bacterial infections. FEBS J. 279(6):919–931.
  14. Bahadur R, Chodisetti PK, Reddy M. (2021). Cleavage of Braun’s lipoprotein Lpp from the bacterial peptidoglycan by a paralog of L,D-transpeptidases, Ldtf. Proc Natl Acad Sci U S A. 118(19):1-7.
  15. Ishida T. (2019). Comparative bacteriolytic mechanism for Ag+ and Zn2+ ions against S. aureus and E. coli: A review. Ann Microbiol Infect Dis. 2(1):1-12.
  16. Baizman ER, Branstrom AA, Longley CB, Allanson N, Sofia MJ, Gange D,, et al (2000). Antibacterial activity of synthetic analogues based on the disaccharide structure of moenomycin,an inhibitor of bacterial transglycosylase. Microbiology. 246:3129–3140.
  17. Oka T, Hashizumre K, Fujita H. (1980). Inhibition of peptidoglycan transpeptidase by beta-lactam anbiotics: structure- activity relationships. J Antibiotics. 33:1357-1362.
  18. Ortiz-Gilaa MA, Nuñez-Anitab SE, Arenas-Arrocenac MC, Martínez-Álvarezd O, OEmiliano-Ramíreza J, de la Fuente-Hernándezc J, et al. (2015). Silver nanoparticles for the inhibition of S. aureus. Entreciencias. 3(7):133-142.
  19. Mellroth P, Sandalova T. (2014). Structural and Functional Insights into Peptidoglycan Access for the Lytic Amidase LytA of Streptococcus pneumonia. mBio. 5(1):e01120-1113.
  20. Golestannejad, Gavanji S. and Doostmohammadi (2014). In silico analysis of interaction of silver nitrate with Braun lipoprotein in bacterial cell wall. J Chem Pharma Res. 6(12):366-369.
  21. Anna K edziora, Mateusz Speruda, Maciej Wernecki, Bartłomiej Dudek, Katarzyna Kapczynska, et al (2021). How Bacteria Change after Exposure to Silver Nanoformulations: Analysis of the Genome and Outer Membrane Proteome. Pathogens. 10(817):1-14.
  22. Ruth Hall Sedlak, Marketa Hnilova, Carolynn Grosh, Hanson Fong, Francois Baneyx, Dan Schwartz, et al (2012). Engineered Escherichia coli Silver-Binding Periplasmic Protein That Promotes Silver Tolerance. Appl Envir Microbiol. 12(5):2289–2296.
  23. Gaupp R. Ledala N, Somerville GA. (2012). Staphylococal response to oxidative stress. Front Cell Infect Microbiol. 2:1-8.
  24. Kashyap DR, Kuzma M, Kowalczyk DA, Gupta D, Dziarski R. (2017). Bactericidal peptidoglycan recognition protein induces oxidative stress in Escherichia coli through a block in respiratory chain and increase in central carbon catabolism. Mol Microbiol. 105(5):755–776.
  25. Egan AJF, Biboy J, Veer IV, Breukink E, Vollmer W (2015) Activities and regulation of peptidoglycan synthases. Philosophical Transactions B 370(1679):1-20.
  26. Zoll S, Patzold B, Schlag M, Gotz F, Kalbacher H, et al. (2010) Structural Basis of Cell Wall Cleavage by a Staphylococcal Autolysin. PloS Pathogens. 6(3):1-13
  27. Humann J, Lenz LL. (2009) Bacterial peptidoglycan degrading enzymes and their impact on host muropeptido detection. J innate Immun. 1:88-97.
  28. Peters K, Pazos M, Edoo Z, Hugonnet JE, Martorana AM, Polissi A, et al (2018). Copper inhibits peptidoglycan LD-transpeptidases suppressing β-lactam resistance due to bypass of penicillin-binding proteins. Proc Natl Acad Sci U S A. 115 (42):10786–10791.
  29. Chautrand T, Souak D, Chevalier S, Duclairoir-Poc C. (2021). Gram-Negative Bacterial Envelope Homeostasis under Oxidative and Nitrosative Stress. Microorganisms. 10(5):924.
  30. Faiz U, Butt T, Satti L, Hussain W, Hanif F. (2011) Efficacy zinc as an antibacterial agent against enteric bacterial pathogens. J Ayub Med Coll Abbottabad. 23(2):8-21.
  31. Conrady DG, Brescia CC, Horii K, Weiss AA, Hassett DJ, Herr AB. (2008). A zinc-dependent adhesion module is responsible for intercellular adhesion in staphylococcal biofilms. Proc Natl Acad Sci USA. 49:19456-19461.
  32. Erin B. Brazel, Aimee Tan, Stephanie L. Neville, Amy R. Iverson, et al (2022). Dysregulation of Streptococcus pneumoniae zinc homeostasis breaks ampicillin resistance in a pneumonia infection model Cell Reports 38, Issue 2:1-18.
  33. Atilano ML, Pereira PM, Yates J, Reed P, Veiga H, Pinho MG, et al (2010). Teichoic acid are temporal and spatial regulators of peptidoglycan cross-linking in S. aureus. PNAS. 107(44):18991-18996.
  34. Chandrangsu P, Helmann JD. (2016). Intracellular Zn(II) Intoxication Leads to Dysregulation of the PerR Regulon Resulting in Heme Toxicity in Bacillus subtilis. PLoS Genet. 12(12):1-18.
  35. Ong CL, Walker MJ, McEwan AG. (2015). Zinc disrupts central carbon metabolism and capsule biosynthesis in Streptococcus pyogenes. Sci Rep. 5(10779):1-10.
  36. Wang M, Liu LH, Wang S, Li X, Lu X, Gupta D, et al. (2007). Human Peptidoglycan Recognition Proteins Require Zinc to Kill Both Gram- Positive and Gram-Negative Bacteria and Are Synergistic with Antibacterial Peptides. J Immunol. 178:3116-3125.
  37. Prigozhin DM, Mavrici D, Huizar JP, Vansell HJ, Alber T. (2013). Structural and Biochemical Analyses of Mycobacterium tuberculosis N- Acetylmuramyl-L-alanineAmidase Rv3717 Point to a Role in peptidoglycan Fragment Recycling. J Biol Chem. 288(44):31549-31555.
  38. Carroll SA, Hain T, Technow U, Darji A, Pashalidis P, Joseph SW, et al (2003). Identification and Characterization of a Peptidoglycan Hydrolase, MurA of Listeria monocytogenes, a Muramidase Needed for Cell Separation. J. Bacteriology. 185(23):6801-6808.
  39. Peter Mellrotha, Tatyana Sandalovab, Alexey Kikhneyc, Francisco Vilaplanad, Dusan Heseke, Mijoon Leee, et al (2014). Structural and Functional Insights into Peptidoglycan Access for the Lytic Amidase LytA of Streptococcus pneumonia. Mbio asm. Org 5(1):1-10.
  40. Jagielska E, Chojnacka O, Sabała I. (2016). LytM Fusion with SH3b-Like Domain Expands Its Activity to Physiological Conditions, Microb Drug Resist. 22(6):461-469.
  41. Zoll S, Pätzold B, Schlag M, Götz F, Kalbacher H, Stehle T. (2010). Structural Basis of Cell Wall Cleavage by a Staphylococcal Autolysin. PloS Pathogens. 6:1-13.
  42. Ramadurai L1, Lockwood KJ, Nadakavukaren MJ, Jayaswal RK (1999). Characterization of a chromosomally encoded glycyglycine endopeptidase of S. aureus. Microbiol. 145(4):801-808.
  43. Ishida T. (2017). Antibacterial Mechanism of Bacteriolyses of Bacterial Cell Walls by Zinc(Ⅱ) Ion Induced Activations of PGN Autolysins, and DNA damages. J Genes Proteins. 1(1):1-7.
  44. Blindauer CA. (2015). Advances in the molecular understanding of biological zinc transport. The Royal Society of Chemistry. 51:4544-4563.
  45. Dinning AJ, Al-Adham IS, Austin P, Charlton M, Collier PJ. (1998) Pyrithione biocide interactions with bacterial phospholipid head groups. J Appl Microbiol. 85:132-140.
  46. Godlewska R, Wiśniewska K, Pietras Z, Jagusztyn-Krynicka EK. (2009). Peptidoglycan-associated lipoprotein(Pal) of Gram-negative bacteria: function, structure, role in pathogenesis and potential application in immunoprophylaxis. FEMS Microbiol Lett. 298(1):1-11.
  47. Chang TW, Lin YM, Wang CF, Liao YD. (2012). Outer Membrane Lipoprotein Lpp Is Gram-negative Bacterial Cell Surface Receptor for Cationic Antimicrobial Peptides. J Biol Chem. 287. 1:418–428.
  48. Alirezaei M, Mordelet E, Rouach N, Nairn AC, Glowinski J, Prémont J. (2002). Zinc-induced inhibition of protein synthesis and reduction of connexin-43 expression and intercellular communication in mouse cortical astrocytes. Eur J Neurosci. 16(6):1037-1044.
  49. Egan AJF, Biboy J, Veer IV, Breukink E, Vollmer W. (2015). Activities and regulation of peptidoglycan synthases. Philos Trans R Soc Lond B Biol Sci. 370(1679):1-20.
  50. Singh SK, SaiSree L, Amrutha RN, Reddy M. (2012). Three redundant murein endopeptidases catalyze an essential cleavage step in peptidoglycan synthesis of E. coli K12. Mol Microbiol. 86(5):1036-1051.
  51. Ramachandran V, Chandrakala B, Kumar VP, Usha V, Solapure SM, de Sousa SM. (2006). Screen for Inhibitors of the Coupled TransglycosylaseTranspeptidase of Peptidoglycan Biosynthesis in E. coli. Antimicrob Agents Chemother. 50(4):1425-1432.
  52. Rivera I, Molina R, Lee M, Mobashery S, Hermoso JA. (2016). Orthologous and Paralogous AmpD Peptidoglycan Amidases from Gram-Negative Bacteria. Microb Drug Resist. 22(6):470-476.
  53. Pennartz A, Généreux C, Parquet C, Mengin-Lecreulx D, Joris B. (2009). Substrate-Induced Inactivation of the E. coli AmiD N- AcetylmuramoylL-AlanineAmidase Highlights a New Strategy To Inhibit This Class of Enzyme. Antimicrob Agents Chemother. 53(7):2991-2997.
  54. Carrasco-López C, Rojas-Altuve A, Zhang W, Hesek D, Lee M, Barbe S, et al (2011). Crystal Structures of Bacterial Peptidoglycan Amidase AmpD and an Unprecedented Activation Mechanism. J Biol Chem. 286(36):31714-31722.
  55. Wang M, Liu LH, Wang S, Li X, Lu X, Gupta D, et al (2007). Human Peptidoglycan Recognition Proteins Require Zinc to Kill Both Gram- Positive and Gram-negative Bacteria and Are Synergistic with Antibacterial Peptides. J Immunol. 178(5):3116-3125.
  56. DasGupta H, Fan DP. (1979). Purification and Characterization of a Carboxypeptidase-Transpeptidase of Bacillus megaterium Acting on the Tetra peptide Moiety of the Peptidoglycan. J. Biol Chem. 254(13):5672-5682.
  57. Morina F, Vidović M, Kukavica B, VeljovićJovanović S. (2015). Induction of peroxidase isoforms in the roots of two Verbascum Thapsus L. populations is involved in adaptive responses to excess Zn2+ and Cu2+. Botanica SERBICA. 39(2):151-158.
  58. Kashmiri ZN, Mankar SA. (2014). Free radicals and oxidative stress in bacteria. Int J Current Microb Appl Sci. 3:34-40.
  59. Kashyap DR, Rompca A, Gaballa A, Helmann JD, Chan J, Chang CJ. (2014). Peptidoglycan Recognition Proteins Kill Bacteria by Inducing Oxidative, Thiol, and Metal Stress. PLoS Pathogen. 10(7):1-17.
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